Every place has its special birds. Some may be endemic species found nowhere else in the world, while others are more easily seen in certain areas or are simply notable birds remembered as highlights of any tour. The table below lists some birds of special interest found in the areas covered by this tour.
E=Endemic (Found nowhere else); EN=Endangered
LC=Localized within country; NE=Near Endemic; NT=Near Threatened
TH=Threatened; V=Vulnerable, Very Local, or Rare and Local
| 1 | Black Tinamou | Tinamus osgoodi | NE |
| 2 | Orinoco Goose | Neochen jubata | NT |
| 3 | Andean Condor | Vultur gryphus | NT |
| 4 | Solitary Eagle | Harpyhaliaetus solitarius | NT |
| 5 | Crested Eagle | Morphnus guianensis | NT |
| 6 | Harpy Eagle | Harpia harpyja | NT |
| 7 | Black-and-chestnut Eagle | Oroaetus isidori | NT |
| 8 | Wattled Guan | Aburria aburri | NT |
| 9 | Stripe-faced Wood-Quail | Odontophorus balliviani | NE |
| 10 | Buff-breasted Sandpiper | Tryngites subruficollis | NT |
| 11 | Military Macaw | Ara militaris | V |
| 12 | Blue-headed Macaw | Primolius couloni | EN |
| 13 | Golden-plumed Parakeet | Leptosittaca branickii | V |
| 14 | Amazonian Parrotlet | Nannopsittaca dachilleae | NT |
| 15 | Koepcke's Hermit | Phaethornis koepckeae | E |
| 16 | Peruvian Piedtail | Phlogophilus harterti | E |
| 17 | Rufous-webbed Brilliant | Heliodoxa branickii | E |
| 18 | Coppery-naped Puffleg | Eriocnemis sapphiropygia | E |
| 19 | Scaled Metaltail | Metallura aeneocauda | NE |
| 20 | Semicollared Puffbird | Malacoptila semicincta | NE |
| 21 | Scarlet-hooded Barbet | Eubucco tucinkae | NE |
| 22 | Gray-breasted Mountain-Toucan | Andigena hypoglauca | NT |
| 23 | Fine-barred Piculet | Picumnus subtilis | E |
| 24 | Creamy-crested Spinetail | Cranioleuca albicapilla | E |
| 25 | Marcapata Spinetail | Cranioleuca marcapatae | E |
| 26 | Puna Thistletail | Schizoeaca helleri | E |
| 27 | Peruvian Recurvebill | Simoxenops ucayalae | NT |
| 28 | Greater Scythebill | Campylorhamphus pucherani | NT |
| 29 | Yellow-rumped Antwren | Terenura sharpei | NE |
| 30 | Manu Antbird | Cercomacra manu | NE |
| 31 | White-lined Antbird | Percnostola lophotes | NE |
| 32 | Goeldi's Antbird | Myrmeciza goeldii | NE |
| 33 | Rufous-fronted Antthrush | Formicarius rufifrons | NE |
| 34 | Elusive Antpitta | Grallaria eludens | NE |
| 35 | Red-and-white Antpitta | Grallaria erythroleuca | E |
| 36 | White-throated Antpitta | Grallaria albigula | NE |
| 37 | Diademed Tapaculo | Scytalopus schulenbergi | NE |
| 38 | Masked Fruiteater | Pipreola pulchra | E |
| 39 | Black-faced Cotinga | Conioptilon mcilhennyi | NE |
| 40 | Blue-backed Manakin | Chiroxiphia pareola | NE |
| 41 | Cerulean-capped Manakin | Lepidothrix coeruleocapilla | E |
| 42 | Inca Flycatcher | Leptopogon taczanowskii | E |
| 43 | Bolivian Tyrannulet | Zimmerius bolivianus | NE |
| 44 | Red-billed Tyrannulet | Zimmerius cinereicapillus | NE |
| 45 | Long-crested Pygmy-Tyrant | Lophotriccus eulophotes | NE |
| 46 | White-cheeked Tody-Tyrant | Poecilotriccus albifacies | E |
| 47 | Black-backed Tody-Flycatcher | Poecilotriccus pulchellus | E |
| 48 | Buff-throated Tody-Tyrant | Hemitriccus rufigularis | NT |
| 49 | Unadorned Flycatcher | Myiophobus inornatus | NE |
| 50 | Olive-sided Flycatcher | Contopus cooperi | NT |
| 51 | Rufous-bellied Bush-Tyrant | Myiotheretes fuscorufus | NE |
| 52 | Tawny-faced Gnatwren | Microbates cinereiventris | LC |
| 53 | Cerulean Warbler | Dendroica cerulea | V |
| 54 | Golden-bellied Warbler | Basileuterus chrysogaster | E |
| 55 | Black-and-white Tanager | Conothraupis speculigera | NT |
| 56 | Ashy-throated Bush-Tanager | Chlorospingus canigularis | LC |
| 57 | Slaty Tanager | Creurgops dentata | NE |
| 58 | Black-goggled Tanager | Trichothraupis melanops | LC |
| 59 | Golden-collared Tanager | Iridosornis jelskii | NE |
